Representative Publications----Institute of Biochemistry and Cell Biology, Shanghai Institute for Biological Sciences, CAS

Research

Jiachen Wang, Yuelei Zhang, Luonan Chen, Xiaoping Liu,Reconstructing Molecular Networks by Causal Diffusion Do-Calculus Analysis with Deep Learning,Adv Sci.2024 Oct 23.
Yawen Li, Yalin He, Qi Zheng, Jiazhu Zhang, Xinwen Pan, Xi Zhang, Huairui Yuan, Guangchuan Wang, Xin Liu, Xiaolong Zhou, Xueliang Zhu, Tao Ren, Pengfei Sui,Mitochondrial pyruvate carriers control airway basal progenitor cell function through glycolytic-epigenetic reprogramming,Cell Stem Cell.2024 Oct 18.
Weilei Hu, Yifei Bian, Hongbin Ji,TIL Therapy in Lung Cancer: Current Progress and Perspectives,Adv Sci2024 Oct 18.
Shanshan Li, Rui Shao, Shufa Li, Jiao Zhao, Qi Deng, Ping Li, Zhanying Wei, Shuqin Xu, Lin Chen, Baojie Li, Weiguo Zou & Zhenlin Zhang,A monoallelic variant in CCN2 causes an autosomal dominant spondyloepimetaphyseal dysplasia with low bone mass,Bone Res.2024 Oct 16.
Meng-Guo Wang, Luonan Chen, Xiao-Fei Zhang,Dual decoding of cell types and gene expression in spatial transcriptomics with PANDA,Nucleic Acids Res.2024 Oct 15.
Xiuqi Gui, Jing Huang, Linjie Ruan, Yanjun Wu, Xuan Guo, Ruifang Cao, Shuhan Zhou, Fengxiang Tan, Hongwen Zhu, Mushan Li, Guoqing Zhang, Hu Zhou, Lixing Zhan, Xin Liu, Shiqi Tu & Zhen Shao,zMAP toolset: model-based analysis of large-scale proteomic data via a variance stabilizing z-transformation,Genome Biol.2024 Oct 14.
Tong Ge, Xiuqi Gui, Jia-Xi Xu, Wei Xia, Chao-Han Wang, Wenqiang Yang, Kaiyao Huang, Colum Walsh, James G Umen, Jörn Walter, Ya-Rui Du, Hui Chen, Zhen Shao, Guo-Liang Xu,DNA cytosine methylation suppresses meiotic recombination at the sex-determining region,Sci Adv.2024 Oct 11.
Jia-Li Lu, Yichen Dai, Kunqian Ji, Gui-Xin Peng, Hong Li, Chuanzhu Yan, Bin Shen, Xiao-Long Zhou,Taurine hypomodification underlies mitochondrial tRNATrp-related genetic diseases,Nucleic Acids Res.2024 Oct 9.
Huan Zhao, Zixin Liu, Hui Chen, Maoying Han, Mingjun Zhang, Kuo Liu, Hengwei Jin, Xiuxiu Liu, Mengyang Shi, Wenjuan Pu, Markus Werner, Michael Meister, Stefan G Kauschke, Ruilin Sun, Jinjin Wang, Ruling Shen, Qing-Dong Wang, Xin Ma, Jan S Tchorz, Bin Zhou,Identifying specific functional roles for senescence across cell types,Cell.2024 Oct 1.
Chu-Xiao Liu, Li Yang, Ling-Ling Chen,Dynamic conformation: Marching toward circular RNA function and application,Mol Cell.2024 Oct 3.
Xiuyu Lin, Weicheng Chen, Guilin Yang, Jiazhu Zhang, Huilin Wang, Zeyu Liu, Ying Xi, Tao Ren, Bo Liu, Pengfei Sui,Viral infection induces inflammatory signals that coordinate YAP regulation of dysplastic cells in lung alveoli,J Clin Invest.2024 Oct 1.
Yitian Shi, Jiayin Peng, Mengfan Liu, Xiling Qi, Siyu Li, Qiangqiang Li, Qing Jiang, Liming Zheng, Jiankun Xu, Yun Zhao, Yifeng Zhang,Nicotinamide mononucleotide enhances fracture healing by promoting skeletal stem cell proliferation,Theranostics.2024 Sep 16.
Qin Hong, Shuxia Wang, Xiaoli Wang, Wenyu Han，Tian Chen, Yan Liu, Fei Cheng, Song Qin, Shengtao Zhao, Qingwei Liu, Yao Cong, Zhong Huang,Vaccine Potency and Structure of Yeast-Produced Polio Type 2 Stabilized Virus-like Particles,Vaccines.2024 Sep 20.
Junfang Yan, Luonan Chen, Arieh Warshel, Chen Bai,Exploring the Activation Process of the Glycine Receptor,J Am Chem Soc.2024 Sep 16.
Zan Lv, Zixin Liu, Kuo Liu, Xiuyu Lin, Wenjuan Pu, Yan Li, Huan Zhao, Ying Xi, Pengfei Sui, Andrew E Vaughan, Astrid Gillich, Bin Zhou,Alveolar regeneration by airway secretory-cell-derived p63+ progenitors,Cell Stem Cell.2024 Aug 30.
Wenhui Xing, Heng Feng, Bo Jiang, Bo Gao, Jiping Liu, Zaiqi Xie, Yazhuo Zhang, Xuye Hu, Jun Sun, Matthew B Greenblatt, Bo O Zhou, Weiguo Zou,Itm2a expression marks periosteal skeletal stem cells that contribute to bone fracture healing,J Clin Invest.2024 Sep 3.
Keyun Wang, Li Zhang, Sirui Zhang, Ye Liu, Jiawei Mao, Zhen Liu, Lin Xu, Kejia Li, Jianshu Wang, Yanni Ma, Jiayi Wang, Haitao Li, Zefeng Wang, Guohui Li, Hong Cheng & Mingliang Ye,Metabolic labeling based methylome profiling enables functional dissection of histidine methylation in C3H1 zinc fingers,Nat Commun.2024 Aug 28.
Chuyu Fang, Xinwen Pan, Di Li, Wei Chen, Ying Huang, Yawen Chen, Luan Li, Qi Gao, Xin Liang, Dong Li, Xueliang Zhu, Xiumin Yan,Distinct roles of Kif6 and Kif9 in mammalian ciliary trafficking and motility,J Cell Biol.2024 Aug 19.
Meng Liu, Jiehui Chen, Guizhong Cui, Yumin Dai, Mengjiao Song, Chunyu Zhou, Qingyuan Hu, Qingxia Chen, Hongwei Wang, Wanli Chen, Jingdong Jackie Han, Guangdun Peng, Naihe Jing, Yidong Shen,Germline loss in C. elegans enhances longevity by disrupting adhesion between niche and stem cells,EMBO J.2024 Jul 25.
Jia Xu, Siqi Liu, Yirui Ai, Yunbing Zhang, Shifeng Li, Yiping Li,Establishment and transcriptome analysis of single blastomere-derived cell lines from zebrafish,J Genet Genomics.2024 Aug 1.

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